SangerRead-class-MakeBaseCalls {sangeranalyseR} | R Documentation

## MakeBaseCalls

### Description

A SangerRead method which does base calling on SangerRead instance

### Usage

    ## S4 method for signature 'SangerRead'
    MakeBaseCalls(object, signalRatioCutoff = 0.33)

### Arguments

`object` | A SangerRead S4 instance.
`signalRatioCutoff` | The ratio of the height of a secondary peak to a primary peak. Secondary peaks higher than this ratio are annotated. Those below the ratio are excluded. The default value is `0.33`.

### Value

A `SangerRead` instance.

### Examples

    data("sangerReadFData")
    newSangerReadFData <- MakeBaseCalls(sangerReadFData, signalRatioCutoff = 0.22)

[Package sangeranalyseR version 1.2.0 Index]