CountSamplesPerGroup {rnaEditr} | R Documentation

## Find minimum sample Size per group.

### Description

Find minimum sample size for each group which is decided by the combination of variables with class character or factor.

### Usage

    CountSamplesPerGroup(pheno_df, responses_char, covariates_char)

### Arguments

`pheno_df` | A data frame with phenotype and covariates, which should include all the samples in `rnaEdit_df`. Please make sure the input `pheno_df` has the variable named `"sample"` to indicate sample IDs.
`responses_char` | A character vector of names of response variables in `pheno_df`. When respType is set as `"survival"`, `responses_char` should have length 2. The first element must be the name of the variable with follow up time, and the second element must be the status indicator. Status indicator should be coded as 0/1(1=death), TRUE/FALSE(TRUE=death), or 1/2(2=death). Please make sure variable names are in this order. This code has not been tested for interval-censored data yet.
`covariates_char` | A character vector of names of covariate variables in `pheno_df`.

### Value

An integer.

### Examples

      exm_pheno <- readRDS(
        system.file(
        "extdata",
        "pheno_df.RDS",
        package = 'rnaEditr',
        mustWork = TRUE
        )
      )

      CountSamplesPerGroup(
        pheno_df = exm_pheno,
        responses_char = "sample_type",
        covariates_char = "race"
      )

[Package rnaEditr version 1.2.0 Index]