tef {rexposome} | R Documentation

## Function to get the Threshold for effective tests (TEF)

### Description

Function to get the Threshold for effective tests (TEF)

### Usage

    tef(object)

### Arguments

`object` | An `ExWAS` object

### Value

A number indicating the efective threshold.

### References

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets. Miao-Xin Li, Juilian M. Y. Yeung, Stacey S. Cherny and Pak C. Sham. May 2012 Hum Genet.

### See Also

exwas as a constructor for ExWAS objects

### Examples

    data(exposome)
    w1 <- exwas(expo[1:5, ], asthma~1, family = "binomial")
    w2 <- exwas(expo[1:5, ], asthma~sex+age, family = "binomial")
    tef(w1)
    tef(w2)

[Package rexposome version 1.14.1 Index]