quantroPlot {quantro} | R Documentation

## Plot results from `quantro` function.

### Description

This function plots the histogram of the null test statistics from permutation test in the `quantro` function.

### Usage

    quantroPlot(
      object,
      savePlot = FALSE,
      xLab = NULL,
      yLab = NULL,
      mainLab = NULL,
      binWidth = NULL
    )

### Arguments

`object` | a quantro object from `quantro`
`savePlot` | a TRUE/FALSE object argument determining if the plot will be saved for further use or immediately displayed on the screen.
`xLab` | label for x-axis
`yLab` | label for y-axis
`mainLab` | title of plot
`binWidth` | binwidth or histogram. Default is the stat_bin default.

### Value

A histogram will be plotted containing the null test statistics when using boostrapped samples. The red line is the observed test statistic `quantroStat` from `quantro()`.

### Examples

    library(minfi)
    data(flowSorted)
    p <- getBeta(flowSorted, offset = 100)
    pd <- pData(flowSorted)

    library(doParallel)
    registerDoParallel(cores=4)
    qtest <- quantro(p, pd$CellType, B = 100)
    quantroPlot(qtest)

[Package quantro version 1.26.0 Index]