HMAnalysedPerturbationData-class {perturbatr} | R Documentation

## Data wrapper for analysed perturbation data using a hierarchical model

### Description

Class `HMAnalysedPerturbationData` is a wrapper for various objects of an analysis of a perturbation experiment done using a hierarchical model. Class `HMAnalysedPerturbationData` exposes getters for its members of the same name, but no setters, because the data should be treated as constant once set. Objects of class `HMAnalysedPerturbationData` do not need to be constructed manually but are returned from calling `hm` (see the examples).

### Slots

`nestedGeneEffects`

  the estimated effect sizes for genes on a viral level

`modelFit`

  the fitted model

### Examples

     data(rnaiscreen)
     res <- hm(rnaiscreen)
     class(res)

[Package perturbatr version 1.12.0 Index]