compare_cosmic_v2 {musicatk} | R Documentation

## Compare a result object to COSMIC V2 SBS Signatures (combination whole-exome and whole-genome)

### Description

Compare a result object to COSMIC V2 SBS Signatures (combination whole-exome and whole-genome)

### Usage

    compare_cosmic_v2(
      result,
      threshold = 0.9,
      metric = "cosine",
      result_name = deparse(substitute(result))
    )

### Arguments

`result` | A `musica_result` object.
`threshold` | threshold for similarity
`metric` | One of `"cosine"` for cosine similarity or `"jsd"` for 1 minus the Jensen-Shannon Divergence. Default `"cosine"`.
`result_name` | title for plot user result signatures

### Value

Returns the comparisons

### Examples

    data(res)
    compare_cosmic_v2(res, threshold = 0.7)

[Package musicatk version 1.2.0 Index]