add_inverse_strand {multicrispr} | R Documentation

## Add inverse strand

### Description

Add inverse strand

### Usage

    add_inverse_strand(gr, verbose = FALSE, plot = FALSE, ...)

### Arguments

`gr` | `GRanges-class`
`verbose` | TRUE or FALSE (default)
`plot` | TRUE or FALSE (default)
`...` | `plot_intervals` arguments

### Value

`GRanges-class`

### Examples

    # PE example
    #-----------
        require(magrittr)
        bsgenome <- BSgenome.Hsapiens.UCSC.hg38::BSgenome.Hsapiens.UCSC.hg38
        gr <- char_to_granges(c(PRNP = 'chr20:4699600:+',             # snp
                                HBB  = 'chr11:5227002:-',             # snp
                                HEXA = 'chr15:72346580-72346583:-',   # del
                                CFTR = 'chr7:117559593-117559595:+'), # ins
                              bsgenome)
        add_inverse_strand(gr, plot = TRUE)
    # TFBS example
    #-------------
        bedfile <- system.file('extdata/SRF.bed', package='multicrispr')
        gr <- bed_to_granges(bedfile, genome = 'mm10')
        add_inverse_strand(gr)

[Package multicrispr version 1.2.0 Index]