find_gg {multicrispr} | R Documentation

## Find GG

### Description

Find GG

### Usage

    find_gg(gr)

### Arguments

`gr` | `GRanges-class`

### Value

`GRanges-class`

### Examples

    # PE example
    #-----------
        require(magrittr)
        bsgenome <- BSgenome.Hsapiens.UCSC.hg38::BSgenome.Hsapiens.UCSC.hg38
        gr <- char_to_granges(c(PRNP = 'chr20:4699600:+',            # snp
                                HBB  = 'chr11:5227002:-',             # snp
                                HEXA = 'chr15:72346580-72346583:-',   # del
                                CFTR = 'chr7:117559593-117559595:+'), # ins
                              bsgenome)
        gr %<>% extend_pe_to_gg(plot = TRUE) %>% add_seq(bsgenome)
        find_gg(gr)

[Package multicrispr version 1.2.0 Index]