mirandaIntersectInter {mirTarRnaSeq} | R Documentation

## mirandaIntersectInter Looks for Intersection of Significant output results with miRanda Results from getInputSpeciesDF function

### Description

Compares and looks for intersection if significant output results with miRanda Results from getInputSpeciesDF and outputs a final filterd ourput for only those pairs of miRNA and mRNA which have actually been predicted to be targets in miRanda file function

### Usage

    mirandaIntersectInter(sig_corrs, corrS, mRNA, miRNA, getInputSpeciesDF)

### Arguments

`sig_corrs` | correlation matrix, produced by threshSig
`corrS` | vector of Differences/Correlations, from the sampCorRnaMirna function.
`mRNA` | mRNA FC matrix.
`miRNA` | miRNA FC matrix.
`getInputSpeciesDF` | miranda data, produced by getInputSpecies.

### Value

An object containing data.frames of significant mRNA, miRNA and correlation matrix filtered by miranda input.

### Examples

    x <- mirandaIntersectInter(sig_InterR, outs2, mRNA_fc2, miRNA_fc2, miRandaM)

[Package mirTarRnaSeq version 1.0.0 Index]