one2OneRnaMiRNA {mirTarRnaSeq} | R Documentation

## one2OneRnaMiRNA correlation for miRNA and mRNA using differntial expression fold change and if/when available p-value

### Description

This function inputs accept a list of dataframes and returns an obj with two dataframes called FC and p-value. FC with rownames == genes and columns are FC1, 2, 3, ... (with fold-changes) - P-value with rownames == genes and columns are P1, 2, 3, ... (with p-values) both data.frames have the same order dimensions.

### Usage

    one2OneRnaMiRNA(
      files,
      gene_colname = "Gene",
      fc_colname = "FC",
      pval_colname = "pvalue",
      pthreshold = NULL
    )

### Arguments

`files` | a list of dataframes either miRNAs or mRNAs from various time points.
`gene_colname` | Default is a vector character of length 1 "Gene" user can alter if they choose This column contains the gene names.
`fc_colname` | Default "FC" is coloumn name for fold changes user can alter if they choose.
`pval_colname` | Default is "pvalue" column name for p-values (in input).
`pthreshold` | P-value threshold.

### Value

Correlation dataframe

### Examples

    x <- one2OneRnaMiRNA(files)

[Package mirTarRnaSeq version 1.0.0 Index]