sampCorRnaMirna {mirTarRnaSeq} | R Documentation

## sampCorRnaMirna sampling for correlation for miRNA and mRNA

### Description

This function uses the output of one2OneRnaMiRNA and returns a sampled from original file correlation dataframe depending on user sampling selection.

### Usage

    sampCorRnaMirna(
      mRNA,
      miRNA,
      method = "pearson",
      Shrounds = 100,
      Srounds = 1000
    )

### Arguments

`mRNA` | mRNA file generated from fold changes (FC) obj of the one2OneRnaMiRNA.
`miRNA` | miRNA file generated from fold changes (FC) obj of the one2OneRnaMiRNA.
`method` | Default is "pearson" else use "kendall" or "spearman".
`Shrounds` | number of shuffling over the FC data, default is 100.
`Srounds` | number of sampling from the shuffled data, default is 1000.

### Value

Correlation data frame

### Examples

    x <- sampCorRnaMirna(mRNA_fc, miRNA_fc, method = "pearson", Shrounds = 10, Srounds = 10)

[Package mirTarRnaSeq version 1.0.0 Index]