controlStripPlot {minfi} | R Documentation

## Plot control probe signals.

### Description

Strip plots are produced for each control probe type specified.

### Usage

    controlStripPlot(rgSet, controls = c("BISULFITE CONVERSION I",
        "BISULFITE CONVERSION II"), sampNames = NULL, xlim = c(5, 17))

### Arguments

`rgSet` | An `RGChannelSet`.
`controls` | A vector of control probe types to plot.
`sampNames` | Sample names to be used for labels.
`xlim` | x-axis limits.

### Details

This function produces the control probe signal plot component of the QC report.

### Value

No return value. Plots are produced as a side-effect.

### Author(s)

Martin Aryee aryee@jhu.edu.

### See Also

`qcReport`, `mdsPlot`, `densityPlot`, `densityBeanPlot`

### Examples

    if (require(minfiData)) {

    names <- pData(RGsetEx)$Sample_Name
    controlStripPlot(RGsetEx, controls=c("BISULFITE CONVERSION I"), sampNames=names)

    }

[Package minfi version 1.38.0 Index]