reformatSCE {methylscaper} | R Documentation

## This is an internal function for now and a place-holder in case SingleCellExperiment may be used in the future. We may need to update this later. Assumes rownames are formatted like chr_pos and there are two assays. The assay names are 'methylation_met' for endogenous methylation and 'methylation_acc' for accessibility.

### Description

This is an internal function for now and a place-holder in case SingleCellExperiment may be used in the future. We may need to update this later. Assumes rownames are formatted like chr_pos and there are two assays. The assay names are 'methylation_met' for endogenous methylation and 'methylation_acc' for accessibility.

### Usage

    reformatSCE(dataIn)

### Arguments

`dataIn` | Input SCE object passed to the prepSC() function.

### Value

List object containing the met and acc tables.

[Package methylscaper version 1.0.1 Index]