1e4b0588b1cc60ae964905cb071b20f6 *CITATION
9564ae1b7b2d8685c1ea2f5394aff13a *DESCRIPTION
2a7cea561b9b02ef9bf035b103de2205 *INDEX
5fc56a2c2edc2e82ddbf1bc590597000 *Meta/Rd.rds
03ef3ea9d972fdafc59eaacdd35b33b0 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
474982a176d3b51e0701cecc4fa05e04 *Meta/hsearch.rds
5dda65eb000e2b4f0cf4987ed9259370 *Meta/links.rds
234e6170fa2ec68e6cc2d413a68dc9fa *Meta/nsInfo.rds
5babf894bbb61b4d8b402d43e9b104a6 *Meta/package.rds
9b154c4a590fffe0369fa9369e50e872 *Meta/vignette.rds
9e366f5c9a64cbeeac5bbe91a5f1d1bf *NAMESPACE
4f49a30ed5027704341d456bc4eb9489 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/metaseqR2
d6cf9bc547f8cd7d4203e78294b0683e *R/metaseqR2.rdb
46bbed5443f93b99ae51edbc9a19612d *R/metaseqR2.rdx
3a9b0e3986d8613f604be516db716bed *data/hg19pvalues.rda
c2601ab32e03c2f97b45f1377c57dd2b *data/mm9GeneData.rda
ea351657493f66a7e49deefc93fcbc2a *dna_loader.gif
4532094bc8547307342983e334d08dcc *doc/index.html
cb71226b7c3f51a2df192de39cbc19ac *doc/metaseqr2-annotation.R
00d3db8f1145ba22a7f8280e66ac0087 *doc/metaseqr2-annotation.Rmd
a3d3cdbade4be5ca5475bc7b7c476b53 *doc/metaseqr2-annotation.html
f5567cce74d4c50dda084aa4eea21bf4 *doc/metaseqr2-statistics.R
7320709bece61e64dc3be4818438c746 *doc/metaseqr2-statistics.Rmd
71a1711aded83d8c1ea7c8f7973aa895 *doc/metaseqr2-statistics.html
0570a742c0719f9c89fd542cd2a21f0e *dummy.gtf
f569da454f34cc9b5d1713956b8c81ad *extdata/C.bam
0f64c98b8f96fe0af0e39dd252cb7dc4 *extdata/T.bam
a7094bed2f2d541e29a1f6fecd2306c4 *extra/scvBiasCorrectionFits.rda
430c944b5713607c9f13886ee54331d1 *help/AnIndex
c08a114fe0772d24169b1b8b9173ec07 *help/aliases.rds
84fa3dfed96970aae9a05ae7024158b7 *help/buildAnnotationDatabase.html
60dbfed318a4a386ddea8114a4cf5837 *help/buildCustomAnnotation.html
1991ba3dee3d3d89dc398d6c168d1d84 *help/combineBonferroni.html
e629fe97b9474b80a479fca9c48e2d4e *help/combineHarmonic.html
dc56182f955c221530c0082ae381ab2e *help/combineMaxp.html
6b92ca69d0516422619ecd561aad1bc0 *help/combineMinp.html
cd70e78a92646d5a3d02f9f48d9b2cc1 *help/combineSimes.html
d8a3fa1542b6f40316a0a18e92cec224 *help/combineWeight.html
4330ca705a3c78fd6b773c053242fc77 *help/createSignalTracks.html
143af2372e1f6093fe56ac85a09fb5fd *help/diagplotAvgFtd.html
1377157bab9149f3114f8399b4c6ade0 *help/diagplotBoxplot.html
6524bfc13864953392a4dcf4c880e09e *help/diagplotCor.html
749878c674b9cdee02438b282ad89de5 *help/diagplotDeHeatmap.html
082ea2cdc5270f534217d6b75b4eb04c *help/diagplotEdaseq.html
0119888178258d591776554f617d779c *help/diagplotFiltered.html
25f1300e1f836ab1851ec3ed9fd3a1b9 *help/diagplotFtd.html
17c963276c19f59deb72806d6bc780af *help/diagplotMds.html
23fbc672e14e56bb77ec096fcf68c4a0 *help/diagplotNoiseq.html
f9d75314039b76ebecf0517473c62cc1 *help/diagplotPairs.html
21512a6ae3d1e4c4d74de1d82b2e5104 *help/diagplotRoc.html
42189dfa7600ab601824940362e77034 *help/diagplotVenn.html
be1d09aedc3718bc40348e4232aa91b5 *help/diagplotVolcano.html
d0b49c9b885e90f6fe6086bcc3c312cc *help/downsampleCounts.html
9880030cd8975ddcd3d31354e6a79a1c *help/estimateAufcWeights.html
b2682f29a151d9d2b34aa0cad103e329 *help/estimateSimParams.html
8dd52e435ee1d37ede8c4414575113d2 *help/getAnnotation.html
d96174bee85c96761fcba7083698c5b5 *help/getDefaults.html
41f4f0f6ffee6cbedc6543c82dcce09c *help/getInstalledAnnotations.html
cbdd6be93e57160c0b1307f41ff92c1d *help/getWeights.html
8aff26e06a4e58b324f1c84571501681 *help/hg19pvalues.html
7b8ff8b0e8c09bae6e5be24f7b98ef40 *help/importCustomAnnotation.html
3fdfeb2162c27635a1964016a8cf2055 *help/libsizeListMm9.html
c0b72ee7387fb4d1da3e2a7572774fee *help/loadAnnotation.html
7205ab310b8805b5e1924846a0caea5a *help/makeSimDataSd.html
b49e0a1c5b4438d30bc062366b717f28 *help/makeSimDataTcc.html
d3dd8453b0c676099b33d9715c0dba92 *help/metaTest.html
30febdc1fdef0028d966a77e6ae34343 *help/metaseqR2.rdb
0a11e2a78ecea5851accb1709aaaa7f8 *help/metaseqR2.rdx
d1fa9a57a063b3c3512f425f74828577 *help/metaseqr2.html
cc67f916a493684d9a788a4bf1ea6963 *help/metaseqrPlot.html
080c2e0a953c6cc148be59a62da8a8f6 *help/mm9GeneCounts.html
1fb6722d289b7ba8bbb5c441560aff7f *help/normalizeAbsseq.html
1c487245a1130d427102d373514068ad *help/normalizeDeseq.html
e7e133d6a45afa745ce0f53db5d62d25 *help/normalizeDeseq2.html
f4a8c49ed298ac2c7680ad3ed6a4d674 *help/normalizeDss.html
ff520e0dc03afcf893bb78223aac9069 *help/normalizeEdaseq.html
3d4ff76aee8b4b1134f45c890462297a *help/normalizeEdger.html
ba1980fb8600dbbb2da3d6b37d12f5e9 *help/normalizeNbpseq.html
2380e4032e1b7101afb79dc9f30b15c9 *help/normalizeNoiseq.html
c3ee0084a47e61dc9584f437bcb1df04 *help/paths.rds
82a25f5086dd99adafd00faa7ce34997 *help/read2count.html
46e0eb330dab2eb85adadcde955182d5 *help/readTargets.html
dd747d20432533e1c8ecc86b317e8915 *help/sampleListMm9.html
0b713391dc8254a134b56545e06bb819 *help/statAbsseq.html
fc88e78d91f9f83ddc11b48cac8e8575 *help/statBayseq.html
17838ac9ece253741e6eaace1c6eb1e5 *help/statDeseq.html
c25161029d0af8a5674fe04674e2ff3c *help/statDeseq2.html
84a0d880f16575e5a11e60c91c6cac9e *help/statDss.html
df59f50f112ce2ddc51c78f21d437f81 *help/statEdger.html
cfa2b29113a6cabee231cff271e01c37 *help/statLimma.html
4cd062873c8d819ccf643c283c88ed2f *help/statNbpseq.html
0d0e3ab96723c8c564ac28f1d3f77392 *help/statNoiseq.html
5ae2ca1f3db8dc9fd19bce192070ebf6 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
16b1433ce27182adb91b4224f6cb3a49 *html/buildAnnotationDatabase.html
c1b92ef46901f5f973f8153c665fd477 *html/buildCustomAnnotation.html
ad287417b4ddb4e6b5c71f89430c4194 *html/combineBonferroni.html
7f6210bb6e848520367140bd03bd2a2f *html/combineHarmonic.html
219053dda7d2374934a8dc9697477db8 *html/combineMaxp.html
baec6610d1ad9a60d32f4fa47cd89381 *html/combineMinp.html
0c5491eff20a1cc18f4c71be69b69f08 *html/combineSimes.html
9db4fa9affc6fe38dadfb21d6ba6ddf4 *html/combineWeight.html
75a10fd19e5ff2de2898f0fdb6a060cb *html/createSignalTracks.html
a26f41b31b044f4a626e71530400629d *html/diagplotAvgFtd.html
d168b7ecdf1748410cff316cc21ab52f *html/diagplotBoxplot.html
29c4d899d4e26c759901c47001ce12e4 *html/diagplotCor.html
114a93a94a0be35af6ea579471f6e9ca *html/diagplotDeHeatmap.html
55d7d5c8a45ded90e8f33843c8a11cd6 *html/diagplotEdaseq.html
b544cb4b8b182f3112bb1f21ccfbd295 *html/diagplotFiltered.html
e5ff5620d6c8b96fff8c5070f6850ace *html/diagplotFtd.html
cd60ef8fa21bcf4da7dd7d1e17472e3b *html/diagplotMds.html
fa637d6de608d19c22f08a5d1f3c99a7 *html/diagplotNoiseq.html
66b1542e37df559d61de40cf768274c4 *html/diagplotPairs.html
3964f641b360f76600f6c9cc61c7cfe0 *html/diagplotRoc.html
e87b7df951654f36ee065579ae709cec *html/diagplotVenn.html
cc74624df319af16b69d7bc779953032 *html/diagplotVolcano.html
5c0ced1a418e062f3812f9fa7e5868f4 *html/downsampleCounts.html
cc3f8e2bc4684c11fd38c858477e7f49 *html/estimateAufcWeights.html
74ad5205b0e762aea993e5c463892634 *html/estimateSimParams.html
6ede961ddb6126925fb36af9c89a5bb2 *html/getAnnotation.html
5204d2f44dd8f9c959157caa49fafcea *html/getDefaults.html
3125459b62b9498feeab246eb9b71d40 *html/getInstalledAnnotations.html
16049a7f263f2fc1cf14531b20ef04aa *html/getWeights.html
61296bbfd54622b3317dcc1c783a6538 *html/hg19pvalues.html
50897ebab418c5cfc855066dcd9c9523 *html/importCustomAnnotation.html
03fa7d418cf6b0f103f6ed504794019f *html/libsizeListMm9.html
7dc675886710a98e8f41ca35b3fbb527 *html/loadAnnotation.html
d1b8c7b3bd8fa5f2f48e2e41824b1ea7 *html/makeSimDataSd.html
200b62e17a033f6586816186a3673ca5 *html/makeSimDataTcc.html
46274f0ff7b5b1373bde565eaa64b9c2 *html/metaTest.html
66e5ba49a7c4c548f75637a692b46cd2 *html/metaseqr2.html
0f88d7ecb090b1fa51ff2862966c445a *html/metaseqrPlot.html
61fab31f386042a0754ba29cce0deec6 *html/mm9GeneCounts.html
a31e4e6aaa40228e42a8b19ac199431b *html/normalizeAbsseq.html
7ad9446ffe5a3d89262c5cd09421fc05 *html/normalizeDeseq.html
567a728b302e7936a9d319daad0aee84 *html/normalizeDeseq2.html
e2edac722ae7f4ffddf821ad76fe469c *html/normalizeDss.html
90cbc8d6a9cae8c3d34e40ab71e49d21 *html/normalizeEdaseq.html
54c21fe4d9094c1478420481d8a4fa09 *html/normalizeEdger.html
46f353f69cb8bf7e88362cb913054375 *html/normalizeNbpseq.html
7afb8aa8545c3a5fa49c0f7c34812046 *html/normalizeNoiseq.html
9bb5dab1f80b1c6fc8f479fd1b53616e *html/read2count.html
dd2f6a28c47f6455a0fdd843265e236c *html/readTargets.html
412f7c66350fbbcf793fb9500a2f57c8 *html/sampleListMm9.html
acaef4a78c26034287c638627c90bcaa *html/statAbsseq.html
093dcbdfa9d69480514e3b4ea64f99f0 *html/statBayseq.html
8d1b818a9161e4362c7872c046cb4571 *html/statDeseq.html
48206325ff6746c14093f4015dd56da7 *html/statDeseq2.html
398b127488f529100749f278ee8d2c95 *html/statDss.html
6bc29974318017a2e9212b1b9d0cf2ff *html/statEdger.html
fa625742f9bdb3508e4a1cc856a73f84 *html/statLimma.html
8f6c667cd5945e1d948c538ce8226824 *html/statNbpseq.html
3bb2a11f7696744805a21707ea318be5 *html/statNoiseq.html
9c386520cc2f98ef7e50dafeb525d667 *libs/i386/metaseqR2.dll
2d8b5cc1570c3cfa591d462964779c80 *libs/x64/metaseqR2.dll
7b560345d06bf4ed34c383589b5d807b *metaseqr2_report.Rmd
57c1032238f4fc5a409d362a08b9b334 *script/README.txt
bb5f6ffc8d0636f55e219f651402c58f *unitTests/test_estimate_aufc_weights.R
ce70c12fa38005a55fdef329bb0f77c3 *unitTests/test_metaseqr.R
