selectAnchorsParam {metabCombiner} | R Documentation

## List selectAnchors Defaults

### Description

List of default parameters for anchor selection step of main package workflow, which can be used as input for the wrapper functions. See help(selectAnchors) or ?selectAnchors for more details.

### Usage

    selectAnchorsParam(
      useID = FALSE,
      tolmz = 0.003,
      tolQ = 0.3,
      tolrtq = 0.3,
      windx = 0.03,
      windy = 0.03,
      brackets_ignore = c("(", "[", "{")
    )

### Arguments

`useID` | Choice of using IDs for anchor selection; default: FALSE
`tolmz` | m/z tolerance for ordered pair features; default: 0.003
`tolQ` | Q tolerance for ordered pair features; default: 0.3
`tolrtq` | RT quantile tolerance for ordered pair features; default: 0.5
`windx` | X feature RT window parameter. Default: 0.03
`windy` | Y feature RT window parameter. Default: 0.03
`brackets_ignore` | bracket types for ignoring string comparisons

### Value

list of selectAnchors parameters

### See Also

`selectAnchors`, `metabCombine`

### Examples

    sa_param <- selectAnchorsParam(tolmz = 0.002, tolQ = 0.2, windy = 0.02)

[Package metabCombiner version 1.2.2 Index]