addOffsets	addOffsets
callPatterns	callPatterns
callPeaks	callPeaks
cleanCounts	cleanCounts
controlEM	controlEM
epigraHMM	epigraHMM
epigraHMMDataSetFromBam	epigraHMMDataSetFromBam
epigraHMMDataSetFromMatrix	epigraHMMDataSetFromMatrix
expStep	expStep
helas3	helas3
info	info
initializer	initializer
maxStepProb	maxStepProb
normalizeCounts	normalizeCounts
plotCounts	plotCounts
plotPatterns	plotPatterns
segmentGenome	segmentGenome
simulateMarkovChain	simulateMarkovChain
