easyRNASeq RnaSeqParam accessors {easyRNASeq} | R Documentation

## Accessors for RnaSeqParam class

### Description

These functions and generics define 'accessors' (to get and set values) for `RnaSeqParam` objects within the easyRNASeq package. Implemented are:

- annotParam

- bamParam

- countBy

- datasource

- paired

- precision

- stranded

- strandProtocol

- yieldSize

### Usage

    ## S4 method for signature 'RnaSeqParam'
    yieldSize(object)

### Arguments

`object` | An object derived from class `RnaSeqParam`.

### Value

The value of the corresponding slot.

### Author(s)

Nicolas Delhomme

### See Also

- The `AnnotParam` class

- The `BamParam` class

- The `RnaSeqParam` class

The `BamParam yieldSize` accessor

### Examples

    ## create the necessary AnnotParam
    annotParam <- AnnotParam(
                    datasource=system.file(
                                    "extdata",
                                    "Dmel-mRNA-exon-r5.52.gff3",
                                    package="RnaSeqTutorial"))

    ## create the RnaSeqParam
    rsp <- RnaSeqParam(annotParam=annotParam)
    ## get the yieldSize Parameter
    ysize <-yieldSize(rsp)

[Package easyRNASeq version 2.28.0 Index]