getGlobalMeans {compartmap} | R Documentation

## Get the global means of a matrix

### Description

Get the global means of a matrix

### Usage

    getGlobalMeans(obj, targets = NULL, assay = c("atac", "rna"))

### Arguments

`obj` | Input SummarizedExperiment object
`targets` | Column names or indices to indicate which samples to shrink towards
`assay` | What type of assay the data are from

### Value

A vector of global or targeted means

### Examples

    data("k562_scrna_chr14", package = "compartmap")
    scrna.global.means <- getGlobalMeans(k562_scrna_chr14, assay = "rna")

[Package compartmap version 1.10.0 Index]