fixCompartments {compartmap} | R Documentation

## Invert, or "fix", compartments that have a minimum confidence score (1-min.conf)

### Description

Invert, or "fix", compartments that have a minimum confidence score (1-min.conf)

### Usage

    fixCompartments(obj, min.conf = 0.8, parallel = FALSE, cores = 1)

### Arguments

`obj` | Input RaggedExperiment or output of condenseSE
`min.conf` | Minimum confidence score to use
`parallel` | Whether to run in parallel
`cores` | How many cores to use if running in parallel

### Value

A "fixed" set of compartments

[Package compartmap version 1.10.0 Index]