importMapSplice {circRNAprofiler} | R Documentation

## Import circRNAs detected by MapSplice2

### Description

The function importMapSplice is specifically designed to read and adapt the MapSplice2-v2.2.0 output file (circularRNAs.txt). See https://github.com/davidroberson/MapSplice2 for more details.

### Usage

    importMapSplice(pathToFile)

### Arguments

`pathToFile` | A character string specifying the path to the file containing the detected circRNAs.

### Value

A data frame.

### Examples

    # Path to an example file containing circRNA detected by MapSplice2
    pathToFile <- system.file("extdata", "mapsplice/circRNAs_001.txt",
        package="circRNAprofiler")

    # Inner function.
    # Import circRNAs.
    importMapSplice(pathToFile)

[Package circRNAprofiler version 1.6.0 Index]