matchStatsWithDrugSetsID {cTRAP} | R Documentation

## Match identifiers between data and drug sets

### Description

Match identifiers between data and drug sets

### Usage

    matchStatsWithDrugSetsID(
      sets,
      stats,
      col = "values",
      keyColSets = NULL,
      keyColStats = NULL
    )

### Arguments

`sets` | Named list of characters: named sets containing compound identifiers (obtain drug sets by running `prepareDrugSets()`)
`stats` | Named numeric vector or either a `similarPerturbations` or a `targetingDrugs` object (obtained after running `rankSimilarPerturbations` or `predictTargetingDrugs`, respectively)
`col` | Character: name of the column to use for statistics (only required if class of `stats` is either `similarPerturbations` or `targetingDrugs`)
`keyColSets` | Character: column from `sets` to compare with column `keyColStats` from `stats`; automatically selected if `NULL`
`keyColStats` | Character: column from `stats` to compare with column `keyColSets` from `sets`; automatically selected if `NULL`

### Value

Statistic values from input data and corresponding identifiers as names (if no match is found, the original identifier from argument `stats` is used)

[Package cTRAP version 1.10.1 Index]