sample_annotationdata {blacksheepr} | R Documentation

## sample_annotationdata

### Description

Example annotation data for Outlier analysis. This example data is a subset of the data used in the CPTAC3 Breast Cancer exploration study: (doi: 10.1038/nature18003). Each row corresponds to a sample and each column is an binary annotation for that sample.

### Usage

    sample_annotationdata

### Format

A data frame with 76 rows and 6 variables:

PAM50_Her2

  The binary PAM50 Her2 classification for each sample

PAM50_Basal

  The binary PAM50 Basal classification for each sample

PAM50_LumA

  The binary PAM50 LumA classification for each sample

PAM50_LumB

  The binary PAM50 LumB classification for each sample

ER_Status

  The ER Status classification for each sample

PR_Status

  The PR Status classification for each sample

...

### Source

https://cptac-data-portal.georgetown.edu/cptac/s/S029

[Package blacksheepr version 1.6.0 Index]