samplebioassay {bioassayR} | R Documentation

## Sample activity data for use with bioassayR

### Description

This is sample bioactivity data, taken from assay identifier (aid) 1000 in the NCBI PubChem Bioassay database. These data are provided for testing the bioassayR library.

### Usage

    data(samplebioassay)

### Format

A data frame with activity scores for 4 distinct compounds.

`cid`

  unique compound identifer

`activity`

  1=active, 0=inactive, NA=other

`score`

  activity scores

### Source

http://pubchem.ncbi.nlm.nih.gov NCBI PubChem

### References

http://pubchem.ncbi.nlm.nih.gov NCBI Pubchem

### Examples

    ## create a new bioassay object from these sample data
    data(samplebioassay)
    myassay <- new("bioassay",aid="1000", source_id="PubChem BioAssay", targets="116516899",
        target_types="protein", scores=samplebioassay)
    myassay

[Package bioassayR version 1.30.0 Index]