0edb5eb4adf14bda62c71dccc8b81877 *DESCRIPTION
9681026bd80bf772e5b5b7929f9a4030 *INDEX
780a03a3fcc072bfd0395bda46fbd0cf *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
5c16403c0a457559d29af702c80248af *Meta/hsearch.rds
b47fa66ae36f6d62f64262948a0216be *Meta/links.rds
2cd168bbab38a6e808db7a531ccef4df *Meta/nsInfo.rds
4f2ae111e92af1b22f8a8a63a28d6610 *Meta/package.rds
9dba41e0ba575eaaf9407453d9cacf8d *Meta/vignette.rds
8c65bb35bfe7a47e5828a35239208cd1 *NAMESPACE
9f97a9ebbf6f650c1ee1e266c1c2a83a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/XCIR
b2ea2ba889df2e62f3c14186b3e994cb *R/XCIR.rdb
568e583821248c722890d2ee4e7a4613 *R/XCIR.rdx
3329be2343815fcaa228ae57e45d2ee0 *doc/index.html
c5a99eac408d63fe0dbaabee034c70bf *doc/xcir_intro.R
214f65af6cce3f62a80920ee042b5fc5 *doc/xcir_intro.Rmd
a840913ba36918219dcd0bdf90055fae *doc/xcir_intro.html
bbe36fb9e6f63bd5f8219048a4cd4ce7 *examples/betaBinomXI.R
984ae4782d0b04913ab8446738a60b23 *examples/workflow.R
f0e671066730d33636dcea0cbef0edd7 *extdata/13293_2015_53_MOESM1_ESM.xlsx
9e87b83390e3ee75b9770a0fc0f1a899 *extdata/AD_example.vcf
0d02ddeadf87f51f765fe8a35f210480 *extdata/GEU_xcistate_181122.tsv
f0a6230c338e6d09d05c895300ae5f48 *extdata/data2_vignette.tsv
f7a7af93c4727c9450ab83bcb5c809cd *extdata/data34_vignette.tsv
078a517ade51a069b61c251d07b10ed5 *extdata/xciGene.txt
575df2f080d2a02bacd18a49306fa944 *extdata/xciGenes_cotton.txt
6d29a3de32cf2a9c125761381992af59 *extdata/xcig_vignette.txt
e0148d6646572a4d2a376802e533eb1c *help/AnIndex
9d26593c5dc48db2533711708fe35da0 *help/BetaConversion.html
9a71f3d3906ce5e63c9699b121ac4d77 *help/XCIR-package.html
9a71f3d3906ce5e63c9699b121ac4d77 *help/XCIR.html
837c20f4a0305f050c1d1fed9a873e58 *help/XCIR.rdb
c6f838de76623ea15e2ece51ba1e2762 *help/XCIR.rdx
908c9d0e91d5a7259d77c0f025482b20 *help/addAnno.html
f34fc689cfe34a96380f869acefe25f7 *help/aliases.rds
ed5351c71ecc9a8100907b2172507ed8 *help/annotateX.html
61a7c099d6853094f5c112f351677b60 *help/betaBinomXI.html
9d26593c5dc48db2533711708fe35da0 *help/betaParam.html
dd571cf1a4000c0082bafffdfb30e809 *help/consensusXCI.html
444286a371ad8fc3273b2438fae79fbd *help/getGenicDP.html
8ba55d45acca357eb7110fdbe7f08243 *help/getXCIstate.html
43747295130338e09022e0005116b8e8 *help/mart_genes.html
b85783eada0a7c3d8e29992ddce77d19 *help/paths.rds
29fd8e20b0d34cef95625726bc5cddfe *help/plotBBCellFrac.html
60778fa78d1f32fd07a216a3d92a2ec9 *help/plotQC.html
2673ccba07e777a5a2c84924b74aefb3 *help/readRNASNPs.html
0f3a13b02e7116989ada94c4323e6c65 *help/readVCF4.html
0bb5bfb4e6da4fa762fb7a3eef7e90d9 *help/readXCI.html
57c01e190245cc4866f41a332fa86b59 *help/sample_clean.html
c76fa0b809ee01a5cf63d2ba80933019 *html/00Index.html
cca0b68ffc4f336fa2e4f3d8efcc110d *html/BetaConversion.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
8bdd1b7e600985739cb7cef30d8fd2b5 *html/XCIR-package.html
ef3b41911723f0753985fae463df50ea *html/addAnno.html
048fbc6db8f235f4d4850434118021f4 *html/annotateX.html
55bd884768e069a166d62260098a9e89 *html/betaBinomXI.html
af4cab921a70d717fa9c0bbd0015b897 *html/consensusXCI.html
dce69fc2dffb166a81acb90ece92222e *html/getGenicDP.html
e065209c76710c688f4f816b053a7384 *html/getXCIstate.html
97f0d93dde79806a7aec023cf06bd2ff *html/mart_genes.html
265648e7e4de24bcf831f4754d8143f1 *html/plotBBCellFrac.html
06a7a9bbe1e69beb528d2e7e086a570f *html/plotQC.html
737f34d5e572c5364b1076b050651edb *html/readRNASNPs.html
0e756ab591e5c25fab89b2e01a9b0bb1 *html/readVCF4.html
bbca6e4b7032d8f68aeb2b45300c7860 *html/readXCI.html
b3802b29bea6b30257a9d5bef16ca2ce *html/sample_clean.html
