vstUMI4C {UMI4Cats} | R Documentation

## Variance stabilizing transformation

### Description

Using a DDS object performs a variance stabilizing transformation from DESeq2 package to the UMI4C counts

### Usage

    vstUMI4C(dds)

### Arguments

`dds` | DDS object generated by `UMI4C2dds`

### Details

This function estimate the size factors and dispersions of the counts base on `DESeq` for infering the VST distribution and transform raw UMI4C counts.

### Value

DDS object with variance stabilizing transformation counts

[Package UMI4Cats version 1.2.1 Index]