chol_pseudo_time_normalised {TrajectoryGeometry} | R Documentation

## chol_pseudo_time_normalised

### Description

A vector of pseudotime values, normalised to range from 0 to 100, for a trajectory describing the development of cholangiocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.

### Usage

    chol_pseudo_time_normalised

### Format

A vector

A vector of pseudotime values, normalised to range from 0 to 100, for a trajectory describing the development of cholangiocytes from hepatoblasts. Pseudotime values have been inferred using the SlingShot package. The vector is named according to cell ID.

### Source

Single-cell data has been obtained from GEO (GSE90047) and the script used for upstream processing is available at https://github.com/AnnaLaddach/TrajectoryGeometryData

[Package TrajectoryGeometry version 1.0.0 Index]