visualiseBranchPointStats {TrajectoryGeometry} | R Documentation

## Visualise Branch Point Stats

### Description

This function creates plots and extracts statistics for analysing branch points. It returns plots and underlying data for visualising distance metrics and -log10 transformed pvalues (comparison to random trajectories) for trajectories with different starting points.

### Usage

    visualiseBranchPointStats(branchPointData, average = "mean")

### Arguments

`branchPointData` | - the result of analyseBranchPoint
`average` | - if there are multiple distances available for each sampled trajectory, calculate the average using "mean" or "median" (defaults to "mean").

### Value

a list containing: branchPointValues - dataframe containing data underlying distance plot in long format pValues- dataframe containing data underlying p-value plot in long format distancePlot - ggplot object, violin plots of distance metric for sampled paths for different trajectory different starting points pValue - ggplot object, line plot of -log10 transformed p-values for comparing sampled paths to random paths for different trajectory starting points

### Examples

    cholBranchPointStats = visualiseBranchPointStats(chol_branch_point_results)

[Package TrajectoryGeometry version 1.0.0 Index]