hs_probes {TimiRGeN} | R Documentation

## hs_probes

### Description

Gene names and ensemble genes IDs stored as characters. This is used as a demonstration in using a "user made" universe for overenrichment analysis. This is only used in section 3 of the vignette.

### Usage

    data("hs_probes")

### Format

A data frame with 16801 observations on the following 2 variables.

`external_gene_name`

  a character vector of gene names of probes.

`ensembl_gene_id`

  a character vector of ensemble gene IDs of probes.

### Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL6884 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL8227

### References

Camps C, Saini HK, Mole DR, Choudhry H et al. Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxia. Mol Cancer 2014 Feb 11;13:28. PMID: 24517586

### Examples

    data(hs_probes)

[Package TimiRGeN version 1.2.0 Index]