TCGAanalyze_Pathview {TCGAbiolinks} | R Documentation

## Generate pathview graph

### Description

TCGAanalyze_Pathview pathway based data integration and visualization.

### Usage

    TCGAanalyze_Pathview(dataDEGs, pathwayKEGG = "hsa05200")

### Arguments

`dataDEGs` | dataDEGs
`pathwayKEGG` | pathwayKEGG

### Value

an adjacent matrix

### Examples

    ## Not run:
      dataDEGs <- data.frame(mRNA = c("TP53","TP63","TP73"), logFC = c(1,2,3))
      TCGAanalyze_Pathview(dataDEGs)

    ## End(Not run)

[Package TCGAbiolinks version 2.20.1 Index]