getManifest {TCGAbiolinks} | R Documentation

## Get a Manifest from GDCquery output that can be used with GDC-client

### Description

Get a Manifest from GDCquery output that can be used with GDC-client

### Usage

    getManifest(query, save = FALSE)

### Arguments

`query` | A query for GDCquery function
`save` | Write Manifest to a txt file (tab separated)

### Examples

    query <- GDCquery(project = "TARGET-AML",
                      data.category = "Transcriptome Profiling",
                      data.type = "Gene Expression Quantification",
                      workflow.type = "HTSeq - Counts",
                      barcode = c("TARGET-20-PADZCG-04A-01R","TARGET-20-PARJCR-09A-01R"))
    getManifest(query)

[Package TCGAbiolinks version 2.20.1 Index]