get_graph {STRINGdb} | R Documentation

## get_graph

### Description

Return an igraph object with the STRING network (for information about iGraph visit http://igraph.sourceforge.net)

### Usage

    ## S4 method for signature 'STRINGdb'
    get_graph()

### Value

igraph object with the STRING network

### Author(s)

Andrea Franceschini

### References

Csardi G, Nepusz T: The igraph software package for complex network research, InterJournal, Complex Systems 1695. 2006. http://igraph.sf.net

### See Also

In order to simplify the most common tasks, we do also provide convenient functions that wrap some iGraph functions. get_interactions(string_ids) # returns the interactions in between the input proteins get_neighbors(string_ids) # Get the neighborhoods of a protein (or of a vector of proteins) that is given in input. get_subnetwork(string_ids) # returns a subgraph from the given input proteins

[Package STRINGdb version 2.4.2 Index]