physeq {SIAMCAT} | R Documentation

## Retrieve a phyloseq-class object from object.

### Description

Retrieve a phyloseq-class object from object.

### Usage

    physeq(siamcat, verbose=1)

    ## S4 method for signature 'ANY'
    physeq(siamcat, verbose = 1)

    ## S4 method for signature 'phyloseq'
    physeq(siamcat)

### Arguments

`siamcat` | (Required). An instance of siamcat-class that contains a label or instance of phyloseq-class.
`verbose` | If the slot is empty, should a message be printed? values can be either 0 (no output) or 1 (print message)

### Value

The phyloseq-class object or NULL.

### Examples

    data(siamcat_example)
    physeq(siamcat_example)

[Package SIAMCAT version 1.12.0 Index]