findMsMsHR.direct {RMassBank} | R Documentation

## Discontinued: find MS/MS spectrum from open raw file

### Description

This interface has been discontinued. `findMsMsHR` now supports the same parameters (use named parameters).

### Usage

    findMsMsHR.direct(
      msRaw,
      cpdID,
      mode = "pH",
      confirmMode = 0,
      useRtLimit = TRUE,
      ppmFine = getOption("RMassBank")$findMsMsRawSettings$ppmFine,
      mzCoarse = getOption("RMassBank")$findMsMsRawSettings$mzCoarse,
      fillPrecursorScan = getOption("RMassBank")$findMsMsRawSettings$fillPrecursorScan,
      rtMargin = getOption("RMassBank")$rtMargin,
      deprofile = getOption("RMassBank")$deprofile,
      headerCache = NULL
    )

### Arguments

`msRaw` | x
`cpdID` | x
`mode` | x
`confirmMode` | x
`useRtLimit` | x
`ppmFine` | x
`mzCoarse` | x
`fillPrecursorScan` | x
`rtMargin` | x
`deprofile` | x
`headerCache` | x

### Value

an error

### Author(s)

stravsmi

[Package RMassBank version 3.2.0 Index]