geneDrugSensitivity {PharmacoGx} | R Documentation

## Calcualte The Gene Drug Sensitivity

### Description

TODO:: Write a description!

### Usage

    geneDrugSensitivity(
      x,
      type,
      batch,
      drugpheno,
      interaction.typexgene = FALSE,
      model = FALSE,
      standardize = c("SD", "rescale", "none"),
      verbose = FALSE
    )

### Arguments

`x` | A `numeric` vector of gene expression values
`type` | A `vector` of factors specifying the cell lines or type types
`batch` | A `vector` of factors specifying the batch
`drugpheno` | A `numeric` vector of drug sensitivity values (e.g., IC50 or AUC)
`interaction.typexgene` | `boolean` Should interaction between gene expression and cell/type type be computed? Default set to FALSE
`model` | `boolean` Should the full linear model be returned? Default set to FALSE
`standardize` | `character` One of 'SD', 'rescale' or 'none'
`verbose` | `boolean` Should the function display messages?

### Value

A `vector` reporting the effect size (estimateof the coefficient of drug concentration), standard error (se), sample size (n), t statistic, and F statistics and its corresponding p-value.

[Package PharmacoGx version 2.4.0 Index]