librarySize {PhIPData} | R Documentation

## Calculate total read counts for each sample.

### Description

This function is a wrapper function for colSums on the `counts` assay.

### Usage

    librarySize(object, ..., withDimnames = TRUE)

### Arguments

`object` | PhIPData object
`...` | arguments passed to colSums
`withDimnames` | logical; if true, the vector names are the sample names; otherwise the vector is unnamed.

### Value

a named numeric vector. The length of the vector is equal to the number of samples.

### Examples

    example("PhIPData")
    librarySize(phip_obj)

    ## Return an unnamed vector
    librarySize(phip_obj, withDimnames = FALSE)

[Package PhIPData version 1.0.0 Index]