compareModels {PDATK} | R Documentation

## Compare Two Mathematical Models Represented as `S4` Objects

### Description

Compare Two Mathematical Models Represented as `S4` Objects

### Usage

    compareModels(model1, model2, ...)

### Arguments

`model1` | A `S4` object representing some kind of mathematical model.
`model2` | A `S4` object representing some kind of mathematical model.
`...` | Allow new parameters to be defined for this generic.

### Value

A `S4` object with statistics about the performance of each model.

### Examples

    data(sampleValPCOSPmodel)
    data(sampleClinicalModel)
    data(sampleCohortList)

    # Set parallelization settings
    BiocParallel::register(BiocParallel::SerialParam())

    # Train the model
    trainedClinicalModel <- trainModel(sampleClinicalModel)

    # Predict risk/risk-class
    ClinicalPredPCSI <- predictClasses(sampleCohortList[c('PCSI', 'TCGA')],
      model=trainedClinicalModel)

    # Validate the models
    validatedClinicalModel <- validateModel(trainedClinicalModel,
      valData=ClinicalPredPCSI)

    # Compare the models
    modelComp <- compareModels(sampleValPCOSPmodel, validatedClinicalModel)
    head(modelComp)

[Package PDATK version 1.0.2 Index]