get_resources {OmnipathR} | R Documentation

## Retrieve the available resources for a given query type

### Description

Collects the names of the resources available in OmniPath for a certain query type and optionally for a dataset within that.

### Usage

    get_resources(query_type, datasets = NULL, generic_categories = NULL)

### Arguments

`query_type` | one of the query types 'interactions', 'enz_sub', 'complexes', 'annotations' or 'intercell'
`datasets` | currently within the 'interactions' query type only, multiple datasets are available: 'omnipath', 'kinaseextra', 'pathwayextra', 'ligrecextra', 'dorothea', 'tf_target', 'tf_mirna', 'mirnatarget' and 'lncrna_mrna'.
`generic_categories` | for the 'intercell' query type, restrict the search for some generic categories e.g. 'ligand' or 'receptor'.

### Value

a character vector with resource names

### Examples

    get_resources(query_type = 'interactions')

[Package OmnipathR version 3.0.0 Index]