kegg_pathway_list {OmnipathR} | R Documentation

## List of KEGG pathways

### Description

Retrieves a list of available KEGG pathways.

### Usage

    kegg_pathway_list()

### Value

Data frame of pathway names and identifiers.

### See Also

- `kegg_process`

- `kegg_pathway_download`

- `kegg_pathways_download`

- `kegg_open`

- `kegg_picture`

- `kegg_info`

### Examples

    kegg_pws <- kegg_pathway_list()
    kegg_pws
    # # A tibble: 521 x 2
    #    id       name
    #    <chr>    <chr>
    #  1 map01100 Metabolic pathways
    #  2 map01110 Biosynthesis of secondary metabolites
    #  3 map01120 Microbial metabolism in diverse environments
    #  4 map01200 Carbon metabolism
    #  5 map01210 2-Oxocarboxylic acid metabolism
    #  6 map01212 Fatty acid metabolism
    #  7 map01230 Biosynthesis of amino acids
    # # . with 514 more rows

[Package OmnipathR version 3.0.0 Index]