harmonizome_download {OmnipathR} | R Documentation

## Downloads a Harmonizome network dataset

### Description

Downloads a single network dataset from Harmonizome https://maayanlab.cloud/Harmonizome.

### Usage

    harmonizome_download(dataset)

### Arguments

`dataset` | The dataset part of the URL. Please refer to the download section of the Harmonizome webpage.

### Value

Data frame (tibble) with interactions.

### Examples

    harmonizome_data <- harmonizome_download('phosphositeplus')
    harmonizome_data
    # # A tibble: 6,013 x 7
    #    source   source_desc source_id target target_desc target_id weight
    #    <chr>    <chr>           <dbl> <chr>  <chr>           <dbl>  <dbl>
    #  1 TP53     na               7157 STK17A na               9263      1
    #  2 TP53     na               7157 TP53RK na             112858      1
    #  3 TP53     na               7157 SMG1   na              23049      1
    #  4 UPF1     na               5976 SMG1   na              23049      1
    # # . with 6,003 more rows

[Package OmnipathR version 3.0.0 Index]