subsetToFrame {ORFik} | R Documentation

## Subset GRanges to get desired frame.

### Description

Usually used for ORFs to get specific frame (0-2): frame 0, frame 1, frame 2

### Usage

    subsetToFrame(x, frame)

### Arguments

`x` | A tiled to size of 1 GRanges object
`frame` | A numeric indicating which frame to extract

### Details

GRanges object should be beforehand tiled to size of 1. This subsetting takes account for strand.

### Value

GRanges object reduced to only first frame

### Examples

    subsetToFrame(GRanges("1", IRanges(1:10, width = 1), "+"), 2)

[Package ORFik version 1.12.13 Index]