bedToGR {ORFik} | R Documentation

## Converts bed style data.frame to Granges

### Description

For info on columns, see: https://www.ensembl.org/info/website/upload/bed.html

### Usage

    bedToGR(x, skip.name = TRUE)

### Arguments

`x` | A `data.frame` from imported bed-file, to convert to GRanges
`skip.name` | default (TRUE), skip name column (column 4)

### Value

a `GRanges` object from bed

### See Also

Other utils: `convertToOneBasedRanges()`, `export.bed12()`, `export.bigWig()`, `export.wiggle()`, `fimport()`, `findFa()`, `fread.bed()`, `optimizeReads()`, `readBam()`, `readBigWig()`, `readWig()`

[Package ORFik version 1.12.13 Index]