subsetCoverage {ORFik} | R Documentation

## Subset GRanges to get coverage.

### Description

GRanges object should be beforehand tiled to size of 1. This subsetting takes account for strand.

### Usage

    subsetCoverage(cov, y)

### Arguments

`cov` | A coverage object from coverage()
`y` | GRanges object for which coverage should be extracted

### Value

numeric vector of coverage of input GRanges object

### See Also

Other features: `computeFeaturesCage()`, `computeFeatures()`, `countOverlapsW()`, `disengagementScore()`, `distToCds()`, `distToTSS()`, `entropy()`, `floss()`, `fpkm_calc()`, `fpkm()`, `fractionLength()`, `initiationScore()`, `insideOutsideORF()`, `isInFrame()`, `isOverlapping()`, `kozakSequenceScore()`, `orfScore()`, `rankOrder()`, `ribosomeReleaseScore()`, `ribosomeStallingScore()`, `startRegionCoverage()`, `startRegion()`, `stopRegion()`, `translationalEff()`

[Package ORFik version 1.12.13 Index]