corrbased {NoRCE} | R Documentation

## Pearson correlation coefficient value of the miRNA genes between miRNA:mRNA for a given correlation cut-off and cancer.

### Description

Pearson correlation coefficient value of the miRNA genes between miRNA:mRNA for a given correlation cut-off and cancer.

### Usage

    corrbased(mirnagene, cancer, minAbsCor, databaseFile)

### Arguments

`mirnagene` | Data frame of the miRNA genes in mature format
`cancer` | Name of the TCGA project code such as 'BRCA' that is analyzed for miRNA-mRNA correlation. Possible cancer types ACC, BLCA, BRCA, CESC, CHOL, COAD, COADREAD, DLBC, ESCA, GBMLGG, HNSC, KICH, KIPAN, KIRC, KIRP, LGG, LIHC, LUAD, LUSC, OV, PAAD, PCPG, PRAD, READ, SARC, SKCM, STAD, STES, TGCT, THCA, THYM, UCEC, UCS, UVM
`minAbsCor` | Cut-off value for the Pearson correlation coefficient of the miRNA-mRNA
`databaseFile` | Path of the miRcancer.db file

### Value

Data frame of the miRNA-mRNA correlation result

[Package NoRCE version 1.4.0 Index]