extractBiotype {NoRCE} | R Documentation

## Get the biotype of the non-coding genes. It is suitable for the GENCODE gtf files

### Description

Get the biotype of the non-coding genes. It is suitable for the GENCODE gtf files

### Usage

    extractBiotype(gtfFile)

### Arguments

`gtfFile` | Path of the input gtf file which contains biotype information. The gtf file must be provided from the Ensembl or Gencode site. For space efficiency, gft files should be in a zip format.

### Value

Tabular form of the gtf file with the required features such as gene id and biotypes

### Examples

    fileImport<-system.file("extdata", "temp.gtf", package = "NoRCE")
    gtf <- extractBiotype(gtfFile = fileImport)

[Package NoRCE version 1.4.0 Index]