create_tabix_file {NanoMethViz} | R Documentation

## Create a tabix file using methylation calls

### Description

Create a tabix file using methylation calls

### Usage

    create_tabix_file(
      input_files,
      output_file,
      samples = extract_file_names(input_files),
      verbose = TRUE
    )

### Arguments

`input_files` | the files to convert
`output_file` | the output file to write results to (must end in .bgz)
`samples` | the names of samples corresponding to each file
`verbose` | TRUE if progress messages are to be printed

### Value

invisibly returns the output file path, creates a tabix file (.bgz) and its index (.bgz.tbi)

### Examples

    methy_calls <- system.file(package = "NanoMethViz",
        c("sample1_nanopolish.tsv.gz", "sample2_nanopolish.tsv.gz"))
    temp_file <- paste0(tempfile(), ".tsv.bgz")

    create_tabix_file(methy_calls, temp_file)

[Package NanoMethViz version 1.2.0 Index]