NanoMethViz-package {NanoMethViz} | R Documentation

## NanoMethViz: Visualise methlation data from Oxford Nanopore sequencing

### Description

NanoMethViz is a toolkit for visualising methylation data from Oxford Nanopore sequencing. It can be used to explore methylation patterns from reads derived from Oxford Nanopore direct DNA sequencing with methylation called by callers including nanopolish, f5c and megalodon. The plots in this package allow the visualisation of methylation profiles aggregated over experimental groups and across classes of genomic features.

### Details

The main plotting functions in this package are `plot_gene()` and `plot_region()`.

- See `vignette("ImportingData", package = "NanoMethViz")` for how to import data from Nanopolish and f5c.

- See `vignette("Introduction", package = "NanoMethViz")` for how to create visualisations using this package.

### Author(s)

Maintainer: Shian Su su.s@wehi.edu.au

### See Also

Useful links:

- https://github.com/shians/NanoMethViz

- Report bugs at https://github.com/Shians/NanoMethViz/issues

[Package NanoMethViz version 1.2.0 Index]