get_mean_median {MicrobiotaProcess} | R Documentation

## get the mean and median of specific feature.

### Description

get the mean and median of specific feature.

### Usage

    get_mean_median(datameta, feature, subclass)

### Arguments

`datameta` | data.frame, nrow sample * ncol feature + factor.
`feature` | character vector, the feature contained in datameta.
`subclass` | character, factor name.

### Value

featureMeanMedian object, contained the abundance of feature, and the mean and median of feature by subclass.

### Author(s)

Shuangbin Xu

### Examples

    ## Not run:
        data(hmp_aerobiosis_small)
        head(sampleda)
        featureda <- merge(featureda, sampleda, by=0)
        rownames(featureda) <- as.vector(featureda$Row.names)
        featureda$Row.names <- NULL
        feameamed <- get_mean_median(datameta=featureda,
                            feature="p__Actinobacteria",
                            subclass="body_site")
        fplot <- ggdifftaxbar(feameamed, featurename="p__Actinobacteria",
                             classgroup="oxygen_availability", subclass="body_site")

    ## End(Not run)

[Package MicrobiotaProcess version 1.4.4 Index]