show,diffAnalysisClass-method {MicrobiotaProcess} | R Documentation

## method extensions to show for diffAnalysisClass or alphasample objects.

### Description

method extensions to show for diffAnalysisClass or alphasample objects.

### Usage

    ## S4 method for signature 'diffAnalysisClass'
    show(object)

    ## S4 method for signature 'alphasample'
    show(object)

    ## S4 method for signature 'MPSE'
    show(object)

### Arguments

`object` | object, diffAnalysisClass or alphasample class

### Value

print info

### Author(s)

Shuangbin Xu

### Examples

    ## Not run:
    data(kostic2012crc)
    kostic2012crc
    head(phyloseq::sample_data(kostic2012crc),3)
    kostic2012crc <- phyloseq::rarefy_even_depth(kostic2012crc,rngseed=1024)
    table(phyloseq::sample_data(kostic2012crc)$DIAGNOSIS)
    set.seed(1024)
    diffres <- diff_analysis(kostic2012crc, classgroup="DIAGNOSIS",
                            mlfun="lda", filtermod="fdr",
                            firstcomfun = "kruskal.test",
                            firstalpha=0.05, strictmod=TRUE,
                            secondcomfun = "wilcox.test",
                            subclmin=3, subclwilc=TRUE,
                            secondalpha=0.01, lda=3)
    show(diffres)

    ## End(Not run)

[Package MicrobiotaProcess version 1.4.4 Index]