mp_cal_dca {MicrobiotaProcess} | R Documentation

## Detrended Correspondence Analysis with MPSE or tbl_mpse object

### Description

Detrended Correspondence Analysis with MPSE or tbl_mpse object

### Usage

    mp_cal_dca(.data, .abundance, .dim = 3, action = "add", origin = TRUE, ...)

    ## S4 method for signature 'MPSE'
    mp_cal_dca(.data, .abundance, .dim = 3, action = "add", origin = TRUE, ...)

    ## S4 method for signature 'tbl_mpse'
    mp_cal_dca(.data, .abundance, .dim = 3, action = "add", origin = TRUE, ...)

    ## S4 method for signature 'grouped_df_mpse'
    mp_cal_dca(.data, .abundance, .dim = 3, action = "add", origin = TRUE, ...)

### Arguments

`.data` | MPSE or tbl_mpse object
`.abundance` | the name of abundance to be calculated.
`.dim` | integer The number of dimensions to be returned, default is 3.
`action` | character "add" joins the 'decorana' result to the object, "only" return a non-redundant tibble with the 'decorana' result. "get" return 'decorana' object can be processed with related vegan function.
`origin` | logical Use true origin even in detrended correspondence analysis. default is TRUE.
`...` | additional parameters see also 'vegan::decorana'

### Value

update object or tbl according to the action.

[Package MicrobiotaProcess version 1.4.4 Index]