MS2_mergeNetworks       Merge networks
MS2_ppiNetwork          Build signaling-transduction network
MS_changeNames          Transform KEGG IDs into common names
MS_convertGene          Transform Entrez IDs or gene symbols into KEGG
                        IDs
MS_distances            Calculate gene-metabolite distance matrix
MS_exportCytoscape      Export network in cytoscape format
MS_findMappedNodes      Map gene IDs or metabolite IDs onto the network
MS_getPathIds           Get pathway identifiers of a given organism
MS_keggFinder           Get KEGG IDs for compounds, organisms or
                        pathways
MS_keggNetwork          Build MetaboSignal network-table
MS_nodeBW               Get distribution of node betweeness
MS_reactionNetwork      Build reaction-compound network
MS_removeDrugs          Remove edges containing drug nodes
MS_removeNode           Remove undesired nodes from the network
MS_replaceNode          Replace nodes of the network
MS_shortestPaths        Calculate shortest paths
MS_shortestPathsNetwork
                        Build shortest-path subnetwork
MS_tissueFilter         Filter network based on tissue expression data
MS_topologyFilter       Filter network based on distances or
                        betweenness
MetaboSignal_table      Example of MetaboSignal network-table
directionality_reactions
                        List of KEGG reactions with
                        incorrect/inconsistent directionality
hpaNormalTissue         Expression profiles for proteins in human
                        tissues
keggNet_example         KEGG network example
kegg_pathways           Examples of metabolic and signaling human KEGG
                        pathways
mergedNet_example       Network containing KEGG, OmniPath and TRRUST
                        interactions
ppiNet_example          Signaling-transduction network
regulatory_interactions
                        Regulatory interactions from OmniPath and
                        TRRUST
