raw.om {MSstatsTMT} | R Documentation

## Example of MSstatsTMT report from OpenMS for TMT-10plex experiments.

### Description

Example of MSstatsTMT PSM sheet from MaxQuant. It is the input for OpenMStoMSstatsTMTFormat function. It includes peak intensities for 10 proteins among 27 MS runs from three TMT10 mixtures. The important variables are as follows:

### Usage

    raw.om

### Format

A data frame with 860 rows and 13 variables.

### Details

- RetentionTime

- ProteinName

- PeptideSequence

- Charge

- Channel

- Condition

- BioReplicate

- Run

- Mixture

- TechRepMixture

- Fraction

- Intensity

- Reference

### Examples

    head(raw.om)

[Package MSstatsTMT version 2.0.1 Index]