PlotTotalIonCurrent {MQmetrics} | R Documentation

## Total Ion Current

### Description

Total Ion Current

### Usage

    PlotTotalIonCurrent(
      MQCombined,
      show_max_value = TRUE,
      palette = "Set2",
      plots_per_page = 5
    )

### Arguments

`MQCombined` | Object list containing all the files from the MaxQuant output. It is the result from using `make_MQCombined`.
`show_max_value` | If TRUE, it will show the max TIC value of each sample.
`palette` | The palette from the Package RColorBrewer. By default is 'Set2'.
`plots_per_page` | Establish the maximum number of plots per page.

### Value

Returns a plot the Total Ion Current in each sample. The maximum value is also plotted.

### Examples

    MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
    MQCombined <- make_MQCombined(MQPathCombined)
    PlotTotalIonCurrent(MQCombined)

[Package MQmetrics version 1.0.0 Index]