f3262fda7f93ed04c3f1f6ab40ff35ed *CITATION
51e3959a7370ea7257638993fa8f7c36 *DESCRIPTION
e415f0fa9e7add146d12f092354ee148 *INDEX
1df238eb40a010518cd8c63f064da539 *Meta/Rd.rds
3b06f278707f1094408521f7b0ce423f *Meta/data.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
f7f7a2f6fd3311c05fd0f4457da63f2b *Meta/hsearch.rds
b7fb5409da8b54f2172bd20a9b396495 *Meta/links.rds
153411eeeef73b9a16a80f3bf1fe2dba *Meta/nsInfo.rds
2fefe2a4e2cd45b5fe491f6356a08cbe *Meta/package.rds
b1c286a6536262bb19133204a301cd30 *Meta/vignette.rds
1bb0379f2577a205d7b8719a481a327b *NAMESPACE
d0fb148b2058e9bb1c28c2647d444eb0 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/MPRAnalyze
c05c0a0f7f9953fd840da34fda4a7905 *R/MPRAnalyze.rdb
e6270547895e5431e9ce5f6b1486ab36 *R/MPRAnalyze.rdx
60c61bee1d68b8b35a78a2493dbbffb2 *data/ChrEpi.rda
81851cff851b8241dc88c8a9da7f0e21 *doc/index.html
b0a513692adeed2dfa535710e4328fba *doc/vignette.R
5988db2c649472045121f28e80e4cdc0 *doc/vignette.Rmd
289063920bf701ec3674b391fcf82dea *doc/vignette.html
eaa4678830f76474818a4c733bf37060 *help/AnIndex
a27d78326eea518e6e83f5be815ffa25 *help/ChrEpi.html
66db7aedb8c2d53da3129c54f900311b *help/MPRAnalyze.rdb
f80f0aa88f6d9a9daca038fe35759dfe *help/MPRAnalyze.rdx
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/MpraObject,SummarizedExperiment-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/MpraObject,matrix-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/MpraObject.html
0b86bd8f7b38ef32a38a70c0fcd6ffb2 *help/aliases.rds
77a344f331e5ae27aa2e52f7f0495de8 *help/analyzeComparative.html
e937e87e38738a0a79a3a08e9f3b6b0b *help/analyzeQuantification.html
a27d78326eea518e6e83f5be815ffa25 *help/ce.colAnnot.html
a27d78326eea518e6e83f5be815ffa25 *help/ce.control.html
a27d78326eea518e6e83f5be815ffa25 *help/ce.dnaCounts.html
a27d78326eea518e6e83f5be815ffa25 *help/ce.rnaCounts.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/controls,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/controls.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaAnnot,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaAnnot.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaCounts,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaCounts.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaDepth,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/dnaDepth.html
03f90426226a58964ad3115b6e4bdad1 *help/estimateDepthFactors.html
0a2ac8b6165502d89a94d662764d07fe *help/extractModelParameters.html
0a2ac8b6165502d89a94d662764d07fe *help/extractModelParameters_DNA.html
0a2ac8b6165502d89a94d662764d07fe *help/extractModelParameters_RNA.html
d92f3ab385cc05e064cdd9d9c636867f *help/getAlpha.html
b22436bcf8d4829e9a8e4aea102fc2d5 *help/getDistrParam.html
b22436bcf8d4829e9a8e4aea102fc2d5 *help/getDistrParam_DNA.html
b22436bcf8d4829e9a8e4aea102fc2d5 *help/getDistrParam_RNA.html
209793ac596d1e896132acf7227138eb *help/getFits_DNA.html
16bb2a346d5723407c412754fb300425 *help/getFits_RNA.html
0a2ac8b6165502d89a94d662764d07fe *help/getModelParameters_DNA.html
0a2ac8b6165502d89a94d662764d07fe *help/getModelParameters_RNA.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/model,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/model.html
57d2a6a1d8655f70350954f683c34224 *help/paths.rds
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaAnnot,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaAnnot.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaCounts,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaCounts.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaDepth,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rnaDepth.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rowAnnot,MpraObject-method.html
3c7b7f4e9291fa9d56a2b070ccb3c76b *help/rowAnnot.html
d02fdeb39b0db3d26d9d775c077ae474 *help/setDepthFactors.html
720de5da7d72b124362ecf148eaac686 *help/setModel.html
75ca7f3c8b17ee56858d3e1f1b01b9ab *help/simulateMPRA.html
69dab04c89c3e858a1af85022ad73e11 *help/testCoefficient.html
4db7c374916f552717ad7470011432da *help/testEmpirical.html
d1fd614a8581140155620a9b7174b9a5 *help/testLrt.html
b01e6bbcfae1c1df677292f8b0f15eb3 *html/00Index.html
37c933aed43cb5e2d5258cf07bef3f82 *html/ChrEpi.html
0af55e1eb858b8f96ba8a11ac2c12855 *html/MpraObject.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
16e98551fe62d2c5220d31633b48bb86 *html/analyzeComparative.html
84615b6c1b2d798e4d13e9fe9981fff3 *html/analyzeQuantification.html
5f46453a5f5b892fb0dfdbecf0ea6c47 *html/estimateDepthFactors.html
20a6d501d558d861c9042ae898309641 *html/extractModelParameters.html
5cb5b5908b6ea7968f936999e17b3139 *html/getAlpha.html
7e25cbd1ddc9030cfe295542df758f9e *html/getDistrParam.html
5b566ba01aaed3510f86c1e34de1f476 *html/getFits_DNA.html
b5097135f33f01b127263f0a715060d5 *html/getFits_RNA.html
bf0cac9cdf86be8cec9aa961b36f3d11 *html/setDepthFactors.html
72bd20e5456209e29326e3668383a050 *html/setModel.html
c4d40a881b0686e6602507fee38260cb *html/simulateMPRA.html
b63e45900cfb183cdd44d9440ff25829 *html/testCoefficient.html
4304d068c7b376871764972d1e0e6ecb *html/testEmpirical.html
0e3e02151e2b794ef6679948141053f7 *html/testLrt.html
