DotPlotPathway {IRISFGM} | R Documentation

## DotPlotPathway

### Description

Plot dotplot for enrichment pathway

### Usage

    DotPlotPathway(object, ...)

    .dotPlotPathway(
      object = NULL,
      genes.source = c("CTS", "MC", "Bicluster"),
      showCategory = 20
    )

    ## S4 method for signature 'IRISFGM'
    DotPlotPathway(
      object = NULL,
      genes.source = c("CTS", "MC", "Bicluster"),
      showCategory = 20
    )

### Arguments

`object` | Input IRIS-FGM object
`...` | other arguments passed to methods
`genes.source` | Decide the plot source either "CTS", "MC" or "Bicluster." "CTS" means DEGs from DEsingle label, "MC" means DEGs from MC label, and "Bicluster" means using gene module from the selected bicluster.
`showCategory` | Show this number of pathway results.

### Value

This function will generate dot plot for pathway enrichment results.

### Examples

    data("example_object")
    DotPlotPathway(example_object, genes.source = "module" )

[Package IRISFGM version 1.0.0 Index]