# Generated by roxygen2: do not edit by hand

export(AddMeta)
export(CalBinaryMultiSignal)
export(CalBinarySingleSignal)
export(CreateIRISFGMObject)
export(DotPlotPathway)
export(FindClassBasedOnMC)
export(FindGlobalMarkers)
export(FindMarker)
export(GetBinaryMultiSignal)
export(GetBinarySingleSignal)
export(GetLTMGmatrix)
export(PlotDimension)
export(PlotHeatmap)
export(PlotMarkerHeatmap)
export(PlotMeta)
export(PlotModuleNetwork)
export(PlotNetwork)
export(ProcessData)
export(ReadFrom10X_folder)
export(ReadFrom10X_h5)
export(RunBicluster)
export(RunClassification)
export(RunDimensionReduction)
export(RunDiscretization)
export(RunLTMG)
export(RunPathway)
export(SubsetData)
export(getMeta)
exportMethods(AddMeta)
exportMethods(CalBinaryMultiSignal)
exportMethods(CalBinarySingleSignal)
exportMethods(DotPlotPathway)
exportMethods(FindClassBasedOnMC)
exportMethods(FindGlobalMarkers)
exportMethods(FindMarker)
exportMethods(GetBinaryMultiSignal)
exportMethods(GetBinarySingleSignal)
exportMethods(GetLTMGmatrix)
exportMethods(PlotDimension)
exportMethods(PlotHeatmap)
exportMethods(PlotMeta)
exportMethods(PlotModuleNetwork)
exportMethods(PlotNetwork)
exportMethods(ProcessData)
exportMethods(ReadFrom10X_folder)
exportMethods(ReadFrom10X_h5)
exportMethods(RunBicluster)
exportMethods(RunClassification)
exportMethods(RunDimensionReduction)
exportMethods(RunDiscretization)
exportMethods(RunLTMG)
exportMethods(RunPathway)
exportMethods(SubsetData)
exportMethods(getMeta)
import(Polychrome)
import(RColorBrewer)
import(ggplot2)
import(ggraph)
import(grDevices)
import(graphics)
import(knitr)
import(methods)
import(org.Hs.eg.db)
import(org.Mm.eg.db)
import(pheatmap)
import(stats)
import(utils)
importFrom(AdaptGauss,Intersect2Mixtures)
importFrom(AnnotationDbi,select)
importFrom(DEsingle,DEsingle)
importFrom(DEsingle,DEtype)
importFrom(DrImpute,DrImpute)
importFrom(MCL,mcl)
importFrom(Matrix,readMM)
importFrom(Matrix,sparseMatrix)
importFrom(Rcpp,evalCpp)
importFrom(Rcpp,sourceCpp)
importFrom(Seurat,"Idents<-")
importFrom(Seurat,AddMetaData)
importFrom(Seurat,CreateSeuratObject)
importFrom(Seurat,FindAllMarkers)
importFrom(Seurat,FindClusters)
importFrom(Seurat,FindNeighbors)
importFrom(Seurat,FindVariableFeatures)
importFrom(Seurat,Idents)
importFrom(Seurat,RunPCA)
importFrom(Seurat,RunTSNE)
importFrom(Seurat,RunUMAP)
importFrom(Seurat,ScaleData)
importFrom(Seurat,as.sparse)
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,normcounts)
importFrom(anocva,spectralClustering)
importFrom(clusterProfiler,bitr)
importFrom(clusterProfiler,dotplot)
importFrom(clusterProfiler,enrichGO)
importFrom(clusterProfiler,enrichKEGG)
importFrom(colorspace,qualitative_hcl)
importFrom(ggpubr,ggarrange)
importFrom(ggraph,geom_edge_arc)
importFrom(ggraph,geom_node_point)
importFrom(ggraph,geom_node_text)
importFrom(ggraph,ggraph)
importFrom(ggraph,scale_edge_width)
importFrom(ggraph,theme_graph)
importFrom(igraph,"edge.attributes<-")
importFrom(igraph,"vertex.attributes<-")
importFrom(igraph,as_adjacency_matrix)
importFrom(igraph,degree)
importFrom(igraph,edge.attributes)
importFrom(igraph,graph.data.frame)
importFrom(igraph,graph_from_adjacency_matrix)
importFrom(igraph,vertex.attributes)
importFrom(mixtools,normalmixEM)
importFrom(scater,logNormCounts)
importFrom(scater,normalize)
importFrom(scran,computeSumFactors)
importFrom(scran,quickCluster)
useDynLib(IRISFGM)
