PlotMeta {IRISFGM} | R Documentation

## PlotMeta

### Description

This function can plot figure based on numebr total count information and this step is for the quality control. we shoud exclude extreme value in data.

### Usage

    PlotMeta(object, ...)

    .plotMeta(object = NULL)

    ## S4 method for signature 'IRISFGM'
    PlotMeta(object = NULL)

### Arguments

`object` | input IRIS-FGM object
`...` | other arguments passed to methods

### Value

It will generate two violin plots regarding number of RNA count and identified gene number.

### Examples

    x <- matrix(rnorm(100),ncol = 10)
    colnames(x) <- paste0("cell",1:ncol(x))
    rownames(x) <- paste0("gene",1:nrow(x))
    my_meta <- data.frame(row.names = paste0("cell",1:ncol(x)),
    cluster = c(rep("ClusterA",5),rep("ClusterB",5)))
    object <- CreateIRISFGMObject(x)
    object <- AddMeta(object,
    meta.info = my_meta)
    PlotMeta(object)

[Package IRISFGM version 1.0.0 Index]