PlotDimension {IRISFGM} | R Documentation

## PlotDimension

### Description

Generate Umap and it requires user to input cell label index on console window.

### Usage

    PlotDimension(object, ...)

    .plotDimension(object, reduction = "umap", pt_size = 1, idents = NULL)

    ## S4 method for signature 'IRISFGM'
    PlotDimension(object, reduction = "umap", pt_size = 1, idents = NULL)

### Arguments

`object` | Input IRIS-FGM Object
`...` | other arguments passed to methods
`reduction` | Choose one of approaches for dimension reduction, including 'pca', 'tsne', 'umap'.
`pt_size` | Point size, default is 0.
`idents` | set current idents.

### Value

generate plot on umap space.

### Examples

    data("example_object")
    PlotDimension(example_object,idents = "Seurat_r_0.8_k_20")

[Package IRISFGM version 1.0.0 Index]