SC2_Methods {GladiaTOX} | R Documentation

## List of level 2 single-concentration hit-call functions

### Description

`sc2_mthds` returns a list of functions to be used during level 2 single-concentration processing.

### Usage

    sc2_mthds()

### Details

The functions contained in the list returned by `sc2_mthds` return a list of expressions to be executed in the `sc2` (not exported) function environment. The functions are described here for reference purposes, The `sc2_mthds` function is not exported, nor is it intended for use.

All available methods are described in the Available Methods section, listed by the function/method name.

### Value

A list functions

### Available Methods

More information about the level 2 single-concentration processing is available in the package vignette, "Pipeline_Overview."

bmad3

  Add a cutoff value of 3*bmad.

pc20

  Add a cutoff value of 20.

log2_1.2

  Add a cutoff value of log2(1.2).

log10_1.2

  Add a cutoff value of log10(1.2).

bmad5

  Add a cutoff value of 5*bmad.

bmad6

  Add a cutoff value of 6*bmad.

bmad10

  Add a cutoff value of 10*bmad.

pc30orbmad3

  Add a cutoff value of either 30 or 3*bmad, whichever is less.

### Note

This function is not exported and is not intended to be used by the user.

### See Also

`sc2`, `Method functions` to query what methods get applied to each acid

[Package GladiaTOX version 1.8.0 Index]