res_macrophage_IFNg_vs_naive {GeneTonic} | R Documentation

## A sample `DESeqResults` object

### Description

A sample `DESeqResults` object, generated in the `DESeq2` framework

### Details

This `DESeqResults` object on the data from the `macrophage` package has been created comparing IFNg treated samples vs naive samples, accounting for the different cell lines included.

Details on how this object has been created are included in the `create_gt_data.R` script, included in the `scripts` folder of the `GeneTonic` package.

### References

Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", Nature Genetics, January 2018 doi: 10.1038/s41588-018-0046-7.

[Package GeneTonic version 1.4.1 Index]