GeneColorSet {GSEABase} | R Documentation

## Methods to Construct "GeneColorSet" Instances

### Description

`GeneColorSet` is a generic for constructing gene color sets (i.e., gene sets with "coloring" to indicate how features of genes and phenotypes are associated).

### Methods

Available methods are the same as those for `GeneSet`, but a `GeneColorSet` requires an additional `phenotype` argument to identify the phenotype that is being colored. See documentation for `GeneColorSet` for examples.

An additional method is:

`signature(type = "GeneSet", phenotype="character")`

  This method constructs a 'color' gene set from an uncolored gene set.

### See Also

`GeneColorSet-class`

[Package GSEABase version 1.54.0 Index]