createSummaryDocument {ELMER} | R Documentation

## Create summary document for TCGA.pipe function

### Description

This function will create a text file with the date of the last run, which aanalysis were performed, the values of the arguments so the user can keep track

### Usage

    createSummaryDocument(
      analysis = "all",
      argument.values = "defaults",
      genome = NULL,
      mae.path = NULL,
      mode = NULL,
      direction = NULL,
      group.col = NULL,
      group1 = NULL,
      group2 = NULL,
      results.path = NULL
    )

### Arguments

`analysis` | Which analysis were performed
`argument.values` | Other argument values changed
`genome` | Genome of reference hg38 and hg19
`mae.path` | Where mae is stored
`mode` | Mode "supervised" or "unsupervised" used in the analysis
`direction` | Hypo or hyper direction
`group.col` | Group col
`group1` | Group 1
`group2` | Group 2
`results.path` | Path where the results were saved

[Package ELMER version 2.16.0 Index]