compareClusterResult-class {DOSE} | R Documentation

## Class "compareClusterResult" This class represents the comparison result of gene clusters by GO categories at specific level or GO enrichment analysis.

### Description

Class "compareClusterResult" This class represents the comparison result of gene clusters by GO categories at specific level or GO enrichment analysis.

### Slots

`compareClusterResult`

  cluster comparing result

`geneClusters`

  a list of genes

`fun`

  one of groupGO, enrichGO and enrichKEGG

`gene2Symbol`

  gene ID to Symbol

`keytype`

  Gene ID type

`readable`

  logical flag of gene ID in symbol or not.

`.call`

  function call

`termsim`

  Similarity between term

`method`

  method of calculating the similarity between nodes

### Author(s)

Guangchuang Yu https://guangchuangyu.github.io

### See Also

`enrichResult`

[Package DOSE version 3.18.3 Index]