classic1wayAnova {DAPAR} | R Documentation

## Function to perform a One-way Anova statistical test on a MsnBase dataset

### Description

Function to perform a One-way Anova statistical test on a MsnBase dataset

### Usage

    classic1wayAnova(current_line, conditions)

### Arguments

`current_line` | The line currently treated from the quantitative data to perform the ANOVA
`conditions` | The conditions represent the different classes of the studied factor

### Value

A named vector containing all the different values of the aov model

### Author(s)

Hélène Borges

### Examples

    utils::data(Exp1_R25_prot, package='DAPARdata')
    obj <- Exp1_R25_prot[1:1000]
    level <- obj@experimentData@other$typeOfData
    metacell.mask <- match.metacell(GetMetacell(obj), 'missing', level)
    indices <- GetIndices_WholeMatrix(metacell.mask, op='>=', th=1)
    obj <- MetaCellFiltering(obj, indices, cmd='delete')
    anova_tests <- t(apply(Biobase::exprs(obj$new), 1, classic1wayAnova,
    conditions=as.factor(Biobase::pData(obj$new)$Condition)))

[Package DAPAR version 1.24.8 Index]