Metacell_generic {DAPAR} | R Documentation

## Sets the metacell dataframe

### Description

In the quantitative columns, a missing value is identified by no value rather than a value equal to 0. Conversion rules Quanti Tag NA or 0 NA

### Usage

    Metacell_generic(qdata, conds, level)

### Arguments

`qdata` | An object of class `MSnSet`
`conds` | xxx
`level` | xxx

### Value

xxxxx

### Author(s)

Samuel Wieczorek

### Examples

    file <- system.file("extdata", "Exp1_R25_pept.txt", package="DAPARdata")
    data <- read.table(file, header=TRUE, sep="\t",stringsAsFactors = FALSE)
    metadataFile <- system.file("extdata", "samples_Exp1_R25.txt",
    package="DAPARdata")
    metadata <- read.table(metadataFile, header=TRUE, sep="\t", as.is=TRUE,
    stringsAsFactors = FALSE)
    conds <- metadata$Condition
    qdata <- data[1:100,56:61]
    df <- data[1:100 , 43:48]
    df <- Metacell_generic(qdata, conds, level='peptide')

[Package DAPAR version 1.24.8 Index]