histPValue_HC {DAPAR} | R Documentation

## Plots a histogram ov p-values

### Description

This function plots a histogram ov p-values

### Usage

    histPValue_HC(pval_ll, bins = 80, pi0 = 1)

### Arguments

`pval_ll` | xxx
`bins` | xxx
`pi0` | xxx

### Value

A plot

### Author(s)

Samuel Wieczorek

### Examples

    utils::data(Exp1_R25_prot, package='DAPARdata')
    obj <- Exp1_R25_prot[1:1000]
    level <- obj@experimentData@other$typeOfData
    metacell.mask <- match.metacell(GetMetacell(obj), 'missing', level)
    indices <- GetIndices_WholeMatrix(metacell.mask, op='>=', th=1)
    obj <- MetaCellFiltering(obj, indices, cmd='delete')
    qData <- Biobase::exprs(obj$new)
    sTab <- Biobase::pData(obj$new)
    allComp <- limmaCompleteTest(qData,sTab)
    histPValue_HC(allComp$P_Value[1])

[Package DAPAR version 1.24.8 Index]