GetDetailedNbPeptidesUsed {DAPAR} | R Documentation

## Computes the detailed number of peptides used for aggregating each protein

### Description

Method to compute the detailed number of quantified peptides used for aggregating each protein

### Usage

    GetDetailedNbPeptidesUsed(X, qdata.pep)

### Arguments

`X` | An adjacency matrix
`qdata.pep` | A data.frame of quantitative data

### Value

A list of two items

### Author(s)

Samuel Wieczorek

utils::data(Exp1_R25_pept, package='DAPARdata') obj.pep <- Exp1_R25_pept[1:10] protID <- "Protein_group_IDs" X <- BuildAdjacencyMatrix(obj.pep, protID, FALSE) ll.n <- GetDetailedNbPeptidesUsed(X, Biobase::exprs(obj.pep))

[Package DAPAR version 1.24.8 Index]