load_MSIGdb {ChromSCape} | R Documentation

## Load and format MSIGdb pathways using msigdbr package

### Description

Load and format MSIGdb pathways using msigdbr package

### Usage

    load_MSIGdb(ref, GeneSetClasses)

### Arguments

`ref` | Reference genome, either mm10 or hg38
`GeneSetClasses` | Which classes of MSIGdb to load

### Value

A list containing the GeneSet (list), GeneSetDf (data.frame) and GenePool character vector of all possible genes

[Package ChromSCape version 1.2.62 Index]