subsample_scExp {ChromSCape} | R Documentation

## Subsample scExp

### Description

Randomly sample x cells from each sample in a SingleCellExperiment to return a subsampled SingleCellExperiment with all samples having maximum n cells. If n is higher than the number of cell in a sample, this sample will not be subsampled.

### Usage

    subsample_scExp(scExp, n_cells = 500)

### Arguments

`scExp` | A SingleCellExperiment
`n_cells` | An integer number of cells to subsample for each sample (500)

### Value

A subsampled SingleCellExperiment

### Examples

    scExp = create_scExp(create_scDataset_raw()$mat,create_scDataset_raw()$annot)
    scExp_sub = subsample_scExp(scExp,50)
    ## Not run: num_cell_scExp(scExp_sub)

[Package ChromSCape version 1.2.62 Index]