colors_scExp {ChromSCape} | R Documentation

## Adding colors to cells & features

### Description

Adding colors to cells & features

### Usage

    colors_scExp(
      scExp,
      annotCol = "sample_id",
      color_by = "sample_id",
      color_df = NULL
    )

### Arguments

`scExp` | A SingleCellExperiment Object
`annotCol` | Column names to color
`color_by` | If specifying color_df, column names to color
`color_df` | Color data.frame to specify which color for which condition

### Value

A SingleCellExperiment with additionnal "color" columns in colData

### Examples

    data("scExp")
    scExp = colors_scExp(scExp,annotCol = c("sample_id",
    "total_counts"),
     color_by =  c("sample_id","total_counts"))

    #Specific colors using a manually created data.frame :
    color_df = data.frame(sample_id=unique(scExp$sample_id),
     sample_id_color=c("red","blue","green","yellow"))
    scExp = colors_scExp(scExp,annotCol="sample_id",
    color_by="sample_id",color_df=color_df)

[Package ChromSCape version 1.2.62 Index]