concatenate_scBed_into_clusters {ChromSCape} | R Documentation

## Concatenate single-cell BED into clusters

### Description

Concatenate single-cell BED into clusters

### Usage

    concatenate_scBed_into_clusters(affectation, files_list, odir)

### Arguments

`affectation` | Annotation data.frame containing cluster information
`files_list` | Named list of scBED file paths to concatenate. List Names must match affectation$sample_id and basenames must match affectation$barcode.
`odir` | Output directory to write concatenate pseudo-bulk BEDs.

### Value

Merge single-cell BED files into cluster BED files. Ungzip file if BED is gzipped.

[Package ChromSCape version 1.2.62 Index]