frip-methods {ChIPQC} | R Documentation

## Retrieve fraction of reads in peaks

### Description

Retrieve the fraction of reads in peaks

### Methods

`signature(object = "ChIPQCexperiment")`

  Retrieve a `vector` of values representing the proportion of reads that overlap peaks for each sample in an experiment.

`signature(object = "list")`

  Retrieve a `vector` of values representing the proportion of reads that overlap peaks for each sample in a list of ChIPQCsample objects.

`signature(object = "ChIPQCsample")`

  Retrieve a value representing the proportion of reads that overlap the peaks for a sample.

### Author(s)

Thomas Carroll and Rory Stark

### See Also

ChIPQC-package, ChIPQCexperiment, ChIPQCsample

### Examples

    data(example_QCexperiment)
    frip(exampleExp)
    frip(QCsample(exampleExp,1))

[Package ChIPQC version 1.28.0 Index]