plotCoverageHist-methods {ChIPQC} | R Documentation

## Generate coverage histogram plot

### Description

Generate coverage histogram plot.

### Methods

`signature(object = "ChIPQCexperiment")`

  Generate coverage histogram plots for all the samples in an experiment.

`signature(object = "list")`

  Generate coverage histogram plots for all the samples in a list of ChIPQCsamples.

`signature(object = "ChIPQCsample")`

  Generate coverage histogram plots for a sample.

### Note

Uses `ggplot2` for plotting, and returns a `ggplot2` plot dataframe.

### Author(s)

Thomas Carroll and Rory Stark

### See Also

ChIPQC-package, ChIPQCexperiment, ChIPQCsample

### Examples

    data(example_QCexperiment)
    plotCoverageHist(exampleExp,facetBy=c("Tissue","Factor"))
    plotCoverageHist(QCsample(exampleExp,1))

[Package ChIPQC version 1.28.0 Index]