chr_uniform {CNVgears} | R Documentation

## Uniform chromosome notation

### Description

This is a function for internal use in the package, it handles the standardize process of chromosome notation within the other functions.

### Usage

    chr_uniform(DT_in)

### Arguments

`DT_in,` | a `data.table` with a columns named "chr"

### Value

the same `data.table` in input with the "chr" uniformed to the notation "1", "2", ... , "23", "24" for the chromosomes 1:22, X and Y

### Examples

    DT <- data.table::data.table(chr= c("chr1", "chrX", "chr20"))
    DT <- chr_uniform(DT)
    DT

[Package CNVgears version 1.0.0 Index]