validation {CNAnorm} | R Documentation

## Methods for Function addSmooth in Package ‘CNAnorm’

### Description

`validation` segment and smooth perform ratio values in Package ‘CNAnorm’

### Usage

    ## S4 method for signature 'CNAnorm'
    validation(object, peaks = sugg.peaks(object),
        ploidy = sugg.ploidy(object))

### Arguments

`object` | An object of Class `"CNAnorm"`
`peaks` | The user validated location (ratio Test/Normal) of the peaks before normalization.
`ploidy` | The user validated ploidy of the peaks before normalization.

### Value

An object of class `"CNAnorm"`

### Note

It is implicitly called by `discreteNorm` if no validation was manually performed

### Author(s)

Stefano Berri s.berri@leeds.ac.uk

### See Also

`ratio.s`, `CNAnorm-class`

### Examples

    data(CN)
    # see peakPloidy documentation to know how object CN is created
    CN <- validation(CN)

[Package CNAnorm version 1.38.0 Index]